CDS

Accession Number TCMCG075C18634
gbkey CDS
Protein Id XP_017978970.1
Location complement(join(1559398..1559569,1560001..1560191,1560556..1561043,1561117..1561285,1561392..1561467,1561547..1561666,1562267..1562431,1562525..1562615,1563514..1563598,1563696..1563848,1564031..1564087,1564177..1564272,1565022..1565137,1565498..1565534))
Gene LOC18595208
GeneID 18595208
Organism Theobroma cacao

Protein

Length 671aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018123481.1
Definition PREDICTED: auxin response factor 1 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010150        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090693        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTTTGCGGCTCCATCTGCTGAACAACAAGCAGGTATCAAAGATGGTCCTCTGTACCGAGAATTATGGCATGCCTGTGCTGGACCTCTTGTCACACTTCCTCGTGAAGGGGAGCGTGTTTATTACTTCCCACAAGGTCACATGGAACAGCTTGAGGCATCAATGCATCAGGGGTTAGAACACCAAATGCCATCGTTTAATTTGCCATCTAAAATACTTTGCAAAGTGGCTTCTGTTCAGCGTAAGGCTGAACCTGATACGGATGAAGTTTATGCACAATTAACTCTGGTACCTGAAGTTGATCAAAGTGAGGTTACGAGCTCAGATCCCCCACTTCCTGAACCTGAAAGGTGCATAGTCCATTCATTTTGCAAAACTCTTACTGCTTCTGACACTAGCACCCATGGTGGATTCTCGGTTTTGCGTCGGCATGCAGATGATTGTCTGCCCCCACTGGATATGACCCAGCAGCCACCTTGGCAGGAATTGGTTGCAACTGATCTGCATGGCAATGAGTGGCATTTTCGGCATATTTTTCGAGGGCAACCGAGGCGCCACTTACTCACTACTGGGTGGAGTGTCTTTGTTAGTTCCAAAAAATTAGTGGCCGGTGATGCATTTATATTCCTGAGGGGGACAAATGGGGAGCTGCGTGTTGGTGTGAGGAGGCTTATGAGACAACAGACCAACATGCCATCTTCTGTTATATCTAGTCACAGCATGCATCTTGGGGTGCTTGCCACTGCATCCCATGCCATTGCTACAGGAAGTATGTTTTCTGTCTTCTACAAGCCAAGAACAAGCCGGTCTGAGTTCATTGTGAGTGTAAACAAATATCTTGAAGCTCGTAGCCATAAGCTATCCGTTGGGATGAGGTTCAAAATGAGATTTGAGGGTGAAGAGGTTCCTGAAAGAAGGTTCAGTGGCACAATTATTGGTGTTGGGGATAATAAATCATCTGGATGGGCTGATTCTGAGTGGAGATCTCTAAAGGTTCAATGGGATGAACCTTCATCAATCCTGCGCCCTGATAGGGTGTCTCCATGGGAGCTGGAGCCACTTGTTGTGACTAATACCTCTTCAAACTCACAACCTGCACAAAGGAACAAGCGGGCTCGACCACCTGTTCTACCTACACCATCTTCAGATCTTTCTTCACTTGGTATGTGGAAATCACCAGTTGAATCTCCTGCTTTCTCATATTGTGATTCACAACGTGGACATTCATCACCTAAATTCTCCTCTACTGCAAAGCCTAACTCTGTGGGCTTTAGTGGGAATGGTTCAGTTGCTGCAGTTTCTAGCAACTCCATGTATTGGTCTAACAGAGTGGAGAGTGTTACAGAATCTTTTGCACCAGTTGTTAACAAAGAATCTTGTGAAAGAAAGCCGGGCCCTGGGAATGGCTGCAGGCTGTTTGGTATTCAACTTGACAATGTGAACATGGAAGAAAATTCCCCTGTGGCTACAGTTTCTGGGACTGTAGTGGATGACCGGCTTGTTCCATCAGTAGATGCTGACTCTGACCAGCTCTCTGATCCATCAAATCTTAATCGATCTGATCGTCCTTATGTAAGTTGTGATCCTGAGAAGTCATGCCTGAGATCTCCTCAGGAGTCACAGAGCAAGCAAATTCGGAGCTGCACTAAGGTTCACATGCAAGGTATGGTGGTTGGAAGGGCCGTTGATTTGACACGATTTGACTGTTATGAGGACTTGCTAAGGAAGCTGGAGGAGTTGTTTGACATTAAAGGTCAGCTCTGTGGGTCTGCTAGGAATTGGCAGGTTGTCTATACTGATGATGAAGATGACATGATGATGGTTGGGGATGATCCTTGGAATGAGTTTTGCAGCATGGTGAGGAAAATTTTTATCTATACATCAGAGGAAGTTAAAAAGCTATCACCCAAGATAAAACTTCCAGTCAATGATGATAGCAAACCAGCCAAGCCTGGTGTTGACACAGTTGTCAACACTGACGACCGGTCTTCAGTTGTTAGTCCTGGGTGCTAA
Protein:  
MAFAAPSAEQQAGIKDGPLYRELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMHQGLEHQMPSFNLPSKILCKVASVQRKAEPDTDEVYAQLTLVPEVDQSEVTSSDPPLPEPERCIVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGTNGELRVGVRRLMRQQTNMPSSVISSHSMHLGVLATASHAIATGSMFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIIGVGDNKSSGWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVVTNTSSNSQPAQRNKRARPPVLPTPSSDLSSLGMWKSPVESPAFSYCDSQRGHSSPKFSSTAKPNSVGFSGNGSVAAVSSNSMYWSNRVESVTESFAPVVNKESCERKPGPGNGCRLFGIQLDNVNMEENSPVATVSGTVVDDRLVPSVDADSDQLSDPSNLNRSDRPYVSCDPEKSCLRSPQESQSKQIRSCTKVHMQGMVVGRAVDLTRFDCYEDLLRKLEELFDIKGQLCGSARNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVKKLSPKIKLPVNDDSKPAKPGVDTVVNTDDRSSVVSPGC